Data formats

For use with multiview-stitcher, data needs to be transformed into a modified multiscaleimage.MultiscaleImage.

TIFF

Manual reading of tif files is supported with a convenience function.

CZI

Mosaic czi file support thanks to [aicsimageio].

LIF

Mosaic lif file support thanks to [aicsimageio].

NGFF

Support provided by multiscaleimage.MultiscaleImage.

The latest NGFF spec does not fully support the transformations required for stitching applications (yet). Therefore, multiview-stitcher currently defines its own data format, see here.